bibliographic hunter-gatherer mode, misc info

[Mike Marchywka]

I ran across this url,

http://symposium.cshlp.org/content/74/35.abstract

 and the Zotero web form returns a perfectly good result,

@article{doolittle_step-by-step_2009,
	title = {Step-by-step evolution of vertebrate blood coagulation},
	volume = {74},
	issn = {0091-7451, 1943-4456},
	url = {http://symposium.cshlp.org/content/74/35},
	doi = {10.1101/sqb.2009.74.001},
	abstract = {The availability of whole-genome sequences for a variety of vertebrates is making it possible to reconstruct the step-by-step evolution of complex phenomena such as blood coagulation, an event that in mammals involves the interplay of more than two dozen genetically encoded factors. Gene inventories for different organisms are revealing when during vertebrate evolution certain factors first made their appearance in or, on occasion, disappeared from some lineages. The whole-genome sequence databases of two protochordates and seven nonmammalian vertebrates were examined in search of {\textasciitilde}20 genes known to be associated with blood clotting in mammals. No genuine orthologs were found in the protochordate genomes (sea squirt and amphioxus). As for vertebrates, although the jawless fish have genes for generating the thrombin-catalyzed conversion of fibrinogen to fibrin, they lack several clotting factors, including two thought to be essential for the activation of thrombin in mammals. Fish in general lack genes for the “contact factor” proteases, the predecessor forms of which make their first appearance in tetrapods. The full complement of factors known to be operating in humans does not occur until pouched marsupials (opossum), at least one key factor still absent in egg-laying mammals such as platypus.},
	language = {en},
	urldate = {2022-12-20},
	journal = {Cold Spring Harbor Symposia on Quantitative Biology},
	author = {Doolittle, R. F.},
	month = jan,
	year = {2009},
	pmid = {19667012},
	pages = {35--40},
}


However, in this case I wanted to contact the author and the original
philosophy of bibtex was to include as much stuff as possible-
generally no one cares if it is cluttered. It turned out the
author email address was available but I'm not sure
if Zotero does hunting and gathering as much as just
taking stuff someone thought was important. This makes possible
cleaner bibtex but so what? TooBib did find the email
when it was availble and note too that even thinks
is issn may differ between print and e  
with inconsistent presentation,

 grep "1966\|@\|issn\|mjmhandler" xxxx
% mjmhandler: toobib handledoi(crossref)
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},
% mjmhandler: toobib handledoi(crossref)
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},
% mjmhandler: toobib handledoixml ( quality i=0 szr=4 goods=1 )(crossref)
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},
% mjmhandler: toobib handleadhochtml<-citation
@article{Doolittle_Step_Step_Evolution_2009,
author_email = {rdoolittle at ucsd.edu},
issn = {0091-7451 and 1943-4456},
pmid = {19667012},
% mjmhandler: toobib handleadhochtml<-DC
@article{DUM_Step_Step_Evolution_2009,
% mjmhandler: toobib handleadhochtml<-all
@article{DUM_Step_Step_Evolution_,
citation_author_email = {rdoolittle at ucsd.edu},
citation_issn = {0091-7451 and 1943-4456},
citation_pmid = {19667012},
% mjmhandler: toobib handlegsmeta(scraper)
@article{Doolittle_,
author_email = {rdoolittle at ucsd.edu},
issn = {/> />},
% mjmhandler: toobib handlegsmeta(html)
@article{2009_Doolittle_,
author_email = {rdoolittle at ucsd.edu},
issn = {1943-4456},
public_url = {19667012},
% mjmhandler: toobib handleheadless<-handlepdf
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},
% mjmhandler: toobib handleheadless<-handlepdftext
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},
% mjmhandler: toobib handleheadless<-handlepdftext
@article{Doolittle_Step_Step_Evolution_,
issn = {1943-4456},
issn-type = {0091-7451, print, 1943-4456, electronic},


I'm not sure if the full Zotero includes hunting and gathering
but it may be useful. I have a code to read and maybe
merge entries dealing with duplicate keys but have
not tried to integrate it to TooBib yet. 

I did notice the Zotero web form finally did handle
one pdf file- not sure if they got headless chrome to
work with pdf now :) Still, my "chromate" may make a useful
download utility although I want to replace wscat with
a websocket library :)

fwiw.

-- 

mike marchywka
306 charles cox
canton GA 30115
USA, Earth 
marchywka at hotmail.com
404-788-1216
ORCID: 0000-0001-9237-455X