Generating bibtex entry from a URL: zotero, zbib and TooBib.
Mike Marchywka
marchywka at hotmail.com
Wed May 19 12:55:07 CEST 2021
I went back to this,
https://zbib.org/
and pasted this link into the blank,
https://www.researchgate.net/publication/7305589_Menadione_is_a_metabolite_of_oral_vitamin_K
There was a big red error notice on the page.
This link is useful but the bib entry is a skeleton,
https://zbib.org/0e5ac456090d4969af45b8b33b4e3619
Bibliography
(Pdf) Menadione is a metabolite of oral vitamin K. (n.d.). ResearchGate. https://doi.org/10.1079/BJN20051630
The doi link leads to a page that is probably easier to use for bibtex extraction however.
In fact several ways exist from that page to get a more complete bibtex,
There seem to be 3 unique sources ( cambridge stuff, the meta data, and crossref ),
mjm>
mjm>clip xxxx all
./toobib.h524 cmd=clip p1=xxxx p2=all flags=15 x.flag_to_string(flags,0)=show_decisions show_trial keep_going collect_all
./mjm_med2bib_guesses.h916 % mjmhandler: toobib guessscambridge
% date 2021-05-19:06:52:37 Wed May 19 06:52:37 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: https://www.cambridge.org/core/services/aop-easybib/export/?exportType=bibtex&productIds=D8526A6F32FF9961A013760ED3CD3431&citationStyle=bibtex
@article{thijssen_vervoort_schurgers_shearer_2006,
title={Menadione is a metabolite of oral vitamin K}, volume={95}, DOI={10.1079/BJN20051630}, number={2}, journal={British Journal of Nutrition}, publisher={Cambridge University Press}, author={Thijssen, Henk H. W. and Vervoort, Lily M. T. and Schurgers, Leon J. and Shearer, Martin J.}, year={2006}, pages={260266},
url={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={https://www.cambridge.org/core/services/aop-easybib/export/?exportType=bibtex&productIds=D8526A6F32FF9961A013760ED3CD3431&citationStyle=bibtex}
}
% mjmhandler: toobib handledoi
% date 2021-05-19:06:52:38 Wed May 19 06:52:38 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex
@article{Thijssen_2006,
doi = {10.1079/bjn20051630},
url = {https://doi.org/10.1079%2Fbjn20051630},
year = 2006,
month = {feb},
publisher = {Cambridge University Press ({CUP})},
volume = {95},
number = {2},
pages = {260--266},
author = {Henk H. W. Thijssen and Lily M. T. Vervoort and Leon J. Schurgers and Martin J. Shearer},
title = {Menadione is a metabolite of oral vitamin K},
journal = {British Journal of Nutrition},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex}
}
% mjmhandler: toobib handledoi
% date 2021-05-19:06:52:39 Wed May 19 06:52:39 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex
@article{Thijssen_2006,
doi = {10.1079/bjn20051630},
url = {https://doi.org/10.1079%2Fbjn20051630},
year = 2006,
month = {feb},
publisher = {Cambridge University Press ({CUP})},
volume = {95},
number = {2},
pages = {260--266},
author = {Henk H. W. Thijssen and Lily M. T. Vervoort and Leon J. Schurgers and Martin J. Shearer},
title = {Menadione is a metabolite of oral vitamin K},
journal = {British Journal of Nutrition},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex}
}
% mjmhandler: toobib handledoi
% date 2021-05-19:06:52:39 Wed May 19 06:52:39 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: http://api.crossref.org/works/10.1016/S0304-4165(97)00089-5/transform/application/x-bibtex
@article{Ronden_1998,
doi = {10.1016/s0304-4165(97)00089-5},
url = {https://doi.org/10.1016%2Fs0304-4165%2897%2900089-5},
year = 1998,
month = {jan},
publisher = {Elsevier {BV}},
volume = {1379},
number = {1},
pages = {69--75},
author = {J Ronden},
title = {Intestinal flora is not an intermediate in the phylloquinone-menaquinone-4 conversion in the rat},
journal = {Biochimica et Biophysica Acta ({BBA}) - General Subjects},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={http://api.crossref.org/works/10.1016/S0304-4165(97)00089-5/transform/application/x-bibtex}
}
% mjmhandler: toobib handledoixml
% date 2021-05-19:06:52:40 Wed May 19 06:52:40 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex
@article{Thijssen_2006,
doi = {10.1079/bjn20051630},
url = {https://doi.org/10.1079%2Fbjn20051630},
year = 2006,
month = {feb},
publisher = {Cambridge University Press ({CUP})},
volume = {95},
number = {2},
pages = {260--266},
author = {Henk H. W. Thijssen and Lily M. T. Vervoort and Leon J. Schurgers and Martin J. Shearer},
title = {Menadione is a metabolite of oral vitamin K},
journal = {British Journal of Nutrition},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={http://api.crossref.org/works/10.1079/BJN20051630/transform/application/x-bibtex}
}
% mjmhandler: toobib handlegsmeta(html)
% date 2021-05-19:06:52:41 Wed May 19 06:52:41 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
@article{MenadionemetaboliteHenkThijssen,
abstract = {Phylloquinone is converted into menaquinone-4 and accumulates in extrahepatic tissues. Neither the route nor the function of the conversion is known. One possible metabolic route might be the release of menadione from phylloquinone by catabolic activity. In the present study we explored the presence of menadione in urine and the effect of vitamin K intake on its excretion. Menadione in urine was analysed by HPLC assay with fluorescence detection. Urine from healthy male volunteers was collected before and after administration of a single dose of K vitamins. Basal menadione excretion in non-supplemented subjects (n 6) was 5·4 (sd 3·2) �g/d. Urinary menadione excretion increased greatly after oral intake of the K vitamins, phylloquinone and menaquinone-4 and -7. This effect was apparent within 1–2h and peaked at about 3h after intake. Amounts of menadione excreted in 24h after vitamin K intake ranged, on a molar basis, from 1 to 5% of the administered dose, indicating that about 5–25% of the ingested K vitamins had been catabolized to menadione. Menadione excretion was not enhanced by phylloquinone administered subcutaneously or by 2′,3′-dihydrophylloquinone administered orally. In archived samples from a depletion/repletion study (Booth et al. (2001)Am J Clin Nutr74, 783–790), urinary menadione excretion mirrored dietary phylloquinone intake. The present study shows that menadione is a catabolic product of K vitamins formed after oral intake. The rapid appearance in urine after oral but not subcutaneous administration suggests that catabolism occurs during intestinal absorption. The observations make it likely that part of the menaquinone-4 in tissues results from uptake and prenylation of circulating menadione},
author_institution = {University of Maastricht University of Maastricht University of Maastricht St. Thomas's Hospital},
authors = {Henk H. W. Thijssen and Lily M. T. Vervoort and Leon J. Schurgers and Martin J. Shearer},
date = {2006/02},
doi = {10.1079/BJN20051630},
issn = {1475-2662 0007-1145},
issue = {2},
journal = {British Journal of Nutrition},
keywords = {Menadione; Phylloquinone; Metabolism; Menaquinone-4; Vitamin K},
online_date = {2007/03/08},
pages = {260-266},
pdf_url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/D8526A6F32FF9961A013760ED3CD3431/S0007114506000341a.pdf/div-class-title-menadione-is-a-metabolite-of-oral-vitamin-k-div.pdf},
publisher = {Cambridge University Press},
title = {Menadione is a metabolite of oral vitamin K},
volume = {95},
url={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431}
}
% mjmhandler: toobib handlegsmeta(scraper)
% date 2021-05-19:06:52:41 Wed May 19 06:52:41 EDT 2021
% srcurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
% citeurl: https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431
@article{MenadionemetaboliteHenkThijssen,
abstract = {Phylloquinone is converted into menaquinone-4 and accumulates in extrahepatic tissues. Neither the route nor the function of the conversion is known. One possible metabolic route might be the release of menadione from phylloquinone by catabolic activity. In the present study we explored the presence of menadione in urine and the effect of vitamin K intake on its excretion. Menadione in urine was analysed by HPLC assay with fluorescence detection. Urine from healthy male volunteers was collected before and after administration of a single dose of K vitamins. Basal menadione excretion in non-supplemented subjects (n 6) was 5�4 (sd 3�2) μg/d. Urinary menadione excretion increased greatly after oral intake of the K vitamins, phylloquinone and menaquinone-4 and -7. This effect was apparent within 12h and peaked at about 3h after intake. Amounts of menadione excreted in 24h after vitamin K intake ranged, on a molar basis, from 1 to 5% of the administered dose, indicating that about 525% of the ingested K vitamins had been catabolized to menadione. Menadione excretion was not enhanced by phylloquinone administered subcutaneously or by 2,3-dihydrophylloquinone administered orally. In archived samples from a depletion/repletion study (Booth et al. (2001)Am J Clin Nutr74, 783790), urinary menadione excretion mirrored dietary phylloquinone intake. The present study shows that menadione is a catabolic product of K vitamins formed after oral intake. The rapid appearance in urine after oral but not subcutaneous administration suggests that catabolism occurs during intestinal absorption. The observations make it likely that part of the menaquinone-4 in tissues results from uptake and prenylation of circulating menadione},
author_institution = {University of Maastricht University of Maastricht University of Maastricht St. Thomas#39s Hospital},
authors = {Henk H. W. Thijssen and Lily M. T. Vervoort and Leon J. Schurgers and Martin J. Shearer},
date = {2006/02},
doi = {10.1079/BJN20051630},
issn = {1475-2662 0007-1145},
issue = {2},
journal = {British Journal of Nutrition},
keywords = {Menadione; Phylloquinone; Metabolism; Menaquinone-4; Vitamin K},
online_date = {2007/03/08},
pages = {260-266},
pdf_url = {https://www.cambridge.org/core/services/aop-cambridge-core/content/view/D8526A6F32FF9961A013760ED3CD3431/S0007114506000341a.pdf/div-class-title-menadione-is-a-metabolite-of-oral-vitamin-k-div.pdf},
publisher = {Cambridge University Press},
title = {Menadione is a metabolite of oral vitamin K},
volume = {95},
url={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
srcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
xsrcurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431},
citeurl={https://www.cambridge.org/core/journals/british-journal-of-nutrition/article/menadione-is-a-metabolite-of-oral-vitamin-k/D8526A6F32FF9961A013760ED3CD3431}
}
./mjm_med2bib_guesses.h924 saving to df=xxxx
./mjm_med2bib_guesses.h938 have citation nfound=7 cite=\cite{thijssen_vervoort_schurgers_shearer_2006} something=1 paste_citation=0
mjm>
note new address
Mike Marchywka 306 Charles Cox Drive Canton, GA 30115
2295 Collinworth Drive Marietta GA 30062. formerly 487 Salem Woods Drive Marietta GA 30067 404-788-1216 (C)<- leave message 989-348-4796 (P)<- emergency
________________________________________
From: Jonathan Fine <jfine2358 at gmail.com>
Sent: Wednesday, May 19, 2021 5:57 AM
To: Mike Marchywka
Subject: Re: Generating bibtex entry from a URL: zotero, zbib and TooBib.
Hi Mike
You wrote:
This failed in Zotero,
https://www.researchgate.net/publication/7305589_Menadione_is_a_metabolite_of_oral_vitamin_K
It worked for me, both via the zotero browser plug-in and via zbib.org<http://zbib.org>. For later see
https://zbib.org/0e5ac456090d4969af45b8b33b4e3619
With best regards
Jonathan
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